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Andreas Hildebrandt, Prof. Dr.

Andreas Hildebrandt, Prof. Dr.

Head of Software Engineering and Bioinformatics

Room: 03-433
Johannes Gutenberg - Universität Mainz
Institut für Informatik
Staudingerweg 9

55128 Mainz, Germany

Office Phone: +49-6131-39-23334
Fax number: +49-6131-39-23534



Publications:

Seifert, T, Lund, A, Kneissl, B, Mueller, SC, Tautermann, CS, and Hildebrandt, A (2014).
SKINK: a web server for string kernel based kink prediction in α-helices
Bioinformatics.

Cabezas-Wallscheid, N, Eichwald, V, de Graaf, J, Löwer, M, Lehr, H, Kreft, A, Eshkind, L, Hildebrandt, A, Abassi, Y, Heck, R, Dehof, AK, Ohngemach, S, Sprengel, R, Wörtge, S, Schmitt, S, Lotz, J, Meyer, C, Kindler, T, Zhang, D, Kaina, B, Castle, JC, Trumpp, A, Sahin, U, and Bockamp, E (2013).
Instruction of haematopoietic lineage choices, evolution of transcriptional landscapes and cancer stem cell hierarchies derived from an AML1-ETO mouse model
EMBO Molecular Medicine, 5(12):1804–1820.

Dehof, AK, Loew, S, Lenhof, H, and Hildebrandt, A (2013).
NightShift: NMR Shift Inference by General Hybrid Model Training - a Framework for NMR Chemical Shift Prediction.
BMC Bioinformatics, 14(1):98.

Hildebrandt, AK, Althaus, E, Lenhof, H, Hung, C, Tholey, A, and Hildebrandt, A (2013).
Efficient Interpretation of Tandem Mass Tags in Top-Down Proteomics
In: German Conference on Bioinformatics 2013, ed. by Tim Beißbarth and Martin Kollmar and Andreas Leha and Burkhard Morgenstern and Anne-Kathrin Schultz and Stephan Waack and Edgar Wingender, vol. 34, pp. 56–67, Dagstuhl, Germany, Schloss Dagstuhl–Leibniz-Zentrum fuer Informatik. OpenAccess Series in Informatics (OASIcs) (ISBN: 978-3-939897-59-0).

Hildebrandt, AK, Dietzen, M, Lengauer, T, Lenhof, H, Althaus, E, and Hildebrandt, A (2013).
Efficient computation of root mean square deviations under rigid transformations
Journal of Computational Chemistry:n/a–n/a.

Nickels, S, Stockel, D, Mueller, S, Lenhof, H, Hildebrandt, A, and Dehof, A (2013).
PresentaBALL - A powerful package for presentations and lessons in structural biology
In: Biological Data Visualization (BioVis), 2013 IEEE Symposium on, pp. 33-40.

Benz, F, Hildebrandt, A, and Hack, S (2012).
A Dynamic Program Analysis to find Floating-Point Accuracy Problems
In: PLDI '12: Proceedings of the 2012 ACM SIGPLAN Conference on Programming Language Design and Implementation.

Dietzen, M, Zotenko, E, Hildebrandt, A, and Lengauer, T (2012).
On the applicability of elastic network normal modes in small-molecule docking.
J Chem Inf Model, 52(3):844-56.

Krupp, M, Itzel, T, Maass, T, Hildebrandt, A, Galle, PR, and Teufel, A (2012).
CellLineNavigator: a workbench for cancer cell line analysis
Nucleic acids research.

Nickels, S, Sminia, H, Mueller, S, Kools, B, Dehof, AK, Lenhof, H, and Hildebrandt, A (2012).
ProteinScanAR - An augmented reality web application for high school education in biomolecular life sciences
In: Proceedings of the 6th International Symposium on Information Visualization in Biomedical Informatics (IVBI) 2012.